Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription/translation regulatory transformer protein rfah | C4K41_19135 | Not Available | Positive | 3773930 - 3774418 | 18357.3 |
| 3'-5' ssdna/rna exonuclease tatd | C4K41_19140 | Not Available | Negative | 3774415 - 3775197 | 29036.7 |
| twin-arginine translocase subunit tatc | C4K41_19145 | Not Available | Negative | 3775239 - 3776015 | 28893.9 |
| twin-arginine translocase subunit tatb | C4K41_19150 | Not Available | Negative | 3776018 - 3776533 | 18424.8 |
| twin-arginine translocase subunit tata | C4K41_19155 | Not Available | Negative | 3776537 - 3776806 | 9664.5 |
| ubiquinone biosynthesis protein ubib | C4K41_19160 | Not Available | Negative | 3776885 - 3778525 | 63220.3 |
| ubiquinone biosynthesis protein ubij | C4K41_19165 | Not Available | Negative | 3778522 - 3779127 | 22052.7 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | C4K41_19170 | Not Available | Negative | 3779141 - 3779896 | 28104.8 |
| dna recombination protein rmuc | C4K41_19175 | Not Available | Negative | 3779991 - 3781418 | 54753.6 |
| iclr family transcriptional regulator | C4K41_19180 | Not Available | Positive | 3781635 - 3782402 | 28298.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





