Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ents/ybda mfs transporter | C4K41_19085 | Not Available | Positive | 3753759 - 3762074 | 281607.0 |
| oxidoreductase | C4K41_19090 | Not Available | Positive | 3762294 - 3763154 | 30755.9 |
| protoporphyrinogen oxidase | C4K41_19095 | Not Available | Negative | 3763696 - 3764241 | 21227.4 |
| trk system potassium transporter trkh | C4K41_19100 | Not Available | Negative | 3764253 - 3765704 | 52948.8 |
| yigz family protein | C4K41_19105 | Not Available | Negative | 3765743 - 3766357 | 21690.0 |
| xaa-pro dipeptidase | C4K41_19110 | Not Available | Negative | 3766357 - 3767688 | 50191.9 |
| fatty acid oxidation complex subunit alpha fadb | C4K41_19115 | Not Available | Positive | 3767878 - 3770067 | 79535.5 |
| acetyl-coa c-acyltransferase fada | C4K41_19120 | Not Available | Positive | 3770077 - 3771240 | 40825.6 |
| nad(p)h-flavin reductase | C4K41_19125 | Not Available | Negative | 3771523 - 3772224 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | C4K41_19130 | Not Available | Negative | 3772270 - 3773763 | 55606.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





