Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | C4K41_00580 | Not Available | Positive | 94387 - 96159 | 65873.2 |
| dihydroneopterin triphosphate diphosphatase | C4K41_00585 | Not Available | Positive | 96152 - 96604 | 17244.5 |
| yebc/pmpr family dna-binding transcriptional regulator | C4K41_00590 | Not Available | Positive | 96633 - 97373 | 26438.1 |
| crossover junction endodeoxyribonuclease ruvc | C4K41_00595 | Not Available | Positive | 97408 - 97929 | 18747.9 |
| hypothetical protein | C4K41_00600 | Not Available | Negative | 97931 - 98533 | 22661.2 |
| hypothetical protein | C4K41_00605 | Not Available | Positive | 98605 - 98670 | 2609.36 |
| holliday junction branch migration protein ruva | C4K41_00610 | Not Available | Positive | 98809 - 99420 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | C4K41_00615 | Not Available | Positive | 99429 - 100439 | 37176.0 |
| zinc abc transporter permease | C4K41_00620 | Not Available | Negative | 100656 - 101441 | 27778.5 |
| mn2+/zn2+abc transporter atp-binding protein | C4K41_00625 | Not Available | Negative | 101438 - 102193 | 27869.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





