Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C4K41_10030 | Not Available | Negative | 1960454 - 1961776 | 47226.9 |
| inner membrane protein yhjd | C4K41_10035 | Not Available | Negative | 1962169 - 1963182 | 37902.6 |
| lysr family transcriptional regulator | C4K41_10040 | Not Available | Negative | 1963231 - 1964130 | 33237.4 |
| dna-binding response regulator | C4K41_10045 | Not Available | Positive | 1964650 - 1965252 | 22586.5 |
| trehalase | C4K41_10050 | Not Available | Negative | 1965303 - 1966952 | 63727.1 |
| cytochrome-c peroxidase | C4K41_10055 | Not Available | Positive | 1967357 - 1968754 | 51572.3 |
| glutamate decarboxylase | C4K41_10060 | Not Available | Positive | 1968965 - 1969170 | 7911.3 |
| hypothetical protein | C4K41_10065 | Not Available | Positive | 1969171 - 1970016 | 31195.1 |
| transcriptional regulator | C4K41_10070 | Not Available | Positive | 1970006 - 1970317 | 12035.6 |
| formate acetyltransferase 1 | C4K41_10075 | Not Available | Negative | 1970637 - 1972919 | 85362.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





