Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | C4K41_09770 | Not Available | Positive | 1906707 - 1908029 | 49721.7 |
| xylulokinase | C4K41_09775 | Not Available | Positive | 1908101 - 1909555 | 52613.4 |
| hypothetical protein | C4K41_09780 | Not Available | Positive | 1909724 - 1910065 | 12523.9 |
| hypothetical protein | C4K41_09785 | Not Available | Positive | 1910111 - 1910548 | 16096.6 |
| o-acetyltransferase | C4K41_09790 | Not Available | Negative | 1910590 - 1911585 | 37629.2 |
| hypothetical protein | C4K41_09795 | Not Available | Positive | 1911760 - 1912059 | 11316.8 |
| glycine--trna ligase subunit alpha | C4K41_09800 | Not Available | Positive | 1912154 - 1913065 | 34718.2 |
| glycine--trna ligase subunit beta | C4K41_09805 | Not Available | Positive | 1913075 - 1915144 | 76817.2 |
| hok/gef family protein | C4K41_09810 | Not Available | Positive | 1915407 - 1915619 | 8270.46 |
| cold-shock protein | C4K41_09815 | Not Available | Negative | 1915807 - 1916019 | 7403.66 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





