Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | C4K41_09670 | Not Available | Positive | 1884263 - 1885801 | 56339.5 |
| l-ribulose-5-phosphate 4-epimerase | C4K41_09675 | Not Available | Negative | 1885848 - 1886543 | 25628.5 |
| xylulose 5-phosphate 3-epimerase | C4K41_09680 | Not Available | Negative | 1886537 - 1887397 | 32478.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | C4K41_09685 | Not Available | Negative | 1887390 - 1888052 | 23576.2 |
| carbohydrate kinase | C4K41_09690 | Not Available | Negative | 1888049 - 1889545 | 55199.1 |
| trap transporter substrate-binding protein | C4K41_09695 | Not Available | Negative | 1889549 - 1890535 | 36000.2 |
| l-dehydroascorbate transporter large permease subunit | C4K41_09700 | Not Available | Negative | 1890548 - 1891825 | 45332.0 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | C4K41_09705 | Not Available | Negative | 1891828 - 1892295 | 17284.7 |
| duf4862 domain-containing protein | C4K41_09710 | Not Available | Negative | 1892409 - 1893329 | 34433.8 |
| yhch/yjgk/yial family protein | C4K41_09715 | Not Available | Negative | 1893352 - 1893816 | 17389.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





