Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C4K41_09355 | Not Available | Negative | 1819588 - 1820277 | 25360.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | C4K41_09360 | Not Available | Negative | 1820284 - 1822392 | 79360.1 |
| dna-directed rna polymerase subunit omega | C4K41_09365 | Not Available | Negative | 1822411 - 1822686 | 10237.2 |
| guanylate kinase | C4K41_09370 | Not Available | Negative | 1822741 - 1823364 | 23594.1 |
| dna ligase b | C4K41_09375 | Not Available | Positive | 1823622 - 1825304 | 63231.8 |
| trimeric intracellular cation channel family protein | C4K41_09380 | Not Available | Negative | 1825301 - 1825918 | 22049.8 |
| dna damage-inducible protein d | C4K41_09385 | Not Available | Negative | 1826210 - 1827034 | 31232.8 |
| yicc family protein | C4K41_09390 | Not Available | Negative | 1827256 - 1828119 | 33203.0 |
| hypothetical protein | C4K41_09395 | Not Available | Negative | 1828132 - 1828314 | 6633.33 |
| ribonuclease ph | C4K41_09400 | Not Available | Positive | 1828246 - 1828962 | 25313.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





