Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase isozyme 1 small subunit | C4K41_09200 | Not Available | Positive | 1786215 - 1786505 | 11106.4 |
| transcriptional regulator uhpa | C4K41_09205 | Not Available | Positive | 1786578 - 1787168 | 20837.5 |
| signal transduction histidine-protein kinase/phosphatase uhpb | C4K41_09210 | Not Available | Positive | 1787168 - 1788670 | 56360.4 |
| mfs transporter family glucose-6-phosphate receptor uhpc | C4K41_09215 | Not Available | Positive | 1788680 - 1789999 | 48263.4 |
| hexose phosphate transporter | C4K41_09220 | Not Available | Positive | 1790137 - 1791528 | 50609.6 |
| adenine deaminase | C4K41_09225 | Not Available | Negative | 1791575 - 1793341 | 63854.2 |
| ncs2 family permease | C4K41_09230 | Not Available | Positive | 1793516 - 1794850 | 46976.5 |
| duf1198 domain-containing protein | C4K41_09235 | Not Available | Positive | 1794903 - 1795355 | 17220.1 |
| hypothetical protein | C4K41_09240 | Not Available | Negative | 1795376 - 1795567 | 7123.84 |
| purine ribonucleoside efflux pump nepi | C4K41_09245 | Not Available | Positive | 1795566 - 1796756 | 41850.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





