Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-3-deoxygalactonate kinase | C4K41_09095 | Not Available | Positive | 1767281 - 1768159 | 31447.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C4K41_09100 | Not Available | Positive | 1768143 - 1768760 | 21401.8 |
| d-galactonate dehydratase | C4K41_09105 | Not Available | Positive | 1768757 - 1769905 | 42555.3 |
| mfs transporter | C4K41_09110 | Not Available | Positive | 1770025 - 1770795 | 28657.2 |
| hypothetical protein | C4K41_09115 | Not Available | Positive | 1770841 - 1771317 | 16411.9 |
| protein cbra | C4K41_09120 | Not Available | Negative | 1771278 - 1772378 | 41528.2 |
| duf3748 domain-containing protein | C4K41_09125 | Not Available | Positive | 1772446 - 1773693 | 46344.3 |
| ycek/yidq family lipoprotein | C4K41_09130 | Not Available | Negative | 1773697 - 1774029 | 11837.3 |
| heat-shock protein ibpa | C4K41_09135 | Not Available | Positive | 1774335 - 1774748 | 15774.6 |
| heat-shock protein ibpb | C4K41_09140 | Not Available | Positive | 1774860 - 1775288 | 16094.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





