Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4K41_08995 | Not Available | Negative | 1747126 - 1747875 | 27619.2 |
| hth-type transcriptional regulator yidz | C4K41_09000 | Not Available | Negative | 1748032 - 1748991 | 36911.9 |
| multidrug resistance protein mdtl | C4K41_09005 | Not Available | Negative | 1748966 - 1750141 | 41536.2 |
| tryptophan permease | C4K41_09010 | Not Available | Negative | 1750273 - 1751520 | 45273.3 |
| tryptophanase | C4K41_09015 | Not Available | Negative | 1751612 - 1753027 | 52776.4 |
| tryptophanase leader peptide | C4K41_09020 | Not Available | Negative | 1753248 - 1753322 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C4K41_09025 | Not Available | Negative | 1753564 - 1754928 | 49198.8 |
| membrane protein insertase yidc | C4K41_09030 | Not Available | Negative | 1755034 - 1756680 | 61543.5 |
| membrane protein insertion efficiency factor yidd | C4K41_09035 | Not Available | Negative | 1756683 - 1756940 | 9381.61 |
| ribonuclease p protein component | C4K41_09040 | Not Available | Negative | 1756904 - 1757263 | 13790.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





