Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose operon repressor | C4K41_08790 | Not Available | Negative | 1703244 - 1704236 | 36584.1 |
| ribokinase | C4K41_08795 | Not Available | Negative | 1704240 - 1705169 | 32278.4 |
| ribose abc transporter substrate-binding protein rbsb | C4K41_08800 | Not Available | Negative | 1705295 - 1706185 | 30940.2 |
| ribose abc transporter permease | C4K41_08805 | Not Available | Negative | 1706210 - 1707175 | 33454.0 |
| ribose import atp-binding protein rbsa | C4K41_08810 | Not Available | Negative | 1707180 - 1708685 | 55044.1 |
| d-ribose pyranase | C4K41_08815 | Not Available | Negative | 1708693 - 1709112 | 15240.4 |
| low affinity potassium transport system protein kup | C4K41_08820 | Not Available | Negative | 1709279 - 1711147 | 69298.3 |
| atpase rava | C4K41_08825 | Not Available | Positive | 1711370 - 1712866 | 56354.1 |
| protein viaa | C4K41_08830 | Not Available | Positive | 1712860 - 1714311 | 55942.7 |
| asparagine synthetase a | C4K41_08835 | Not Available | Negative | 1714316 - 1715308 | 36724.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





