Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4K41_08675 | Not Available | Negative | 1682014 - 1682199 | 6722.32 |
| autotransporter outer membrane beta-barrel domain-containing protein | C4K41_08690 | Not Available | Positive | 1683909 - 1688039 | 148025.0 |
| transcriptional regulator | C4K41_08695 | Not Available | Positive | 1688165 - 1688689 | 20037.5 |
| duf4102 domain-containing protein | C4K41_08700 | Not Available | Negative | 1689124 - 1689462 | 12528.3 |
| integrase | C4K41_08705 | Not Available | Positive | 1689720 - 1691054 | 51034.5 |
| hypothetical protein | C4K41_08710 | Not Available | Negative | 1691136 - 1691813 | 24566.1 |
| hypothetical protein | C4K41_08715 | Not Available | Negative | 1691861 - 1693702 | 66844.8 |
| hypothetical protein | C4K41_08720 | Not Available | Negative | 1693737 - 1693934 | 7260.71 |
| minor capsid protein e | C4K41_08725 | Not Available | Negative | 1694099 - 1695127 | 37494.3 |
| hypothetical protein | C4K41_08730 | Not Available | Negative | 1695144 - 1695518 | 12854.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





