Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein irap | C4K41_08140 | Not Available | Negative | 1579500 - 1579760 | 9966.07 |
| hypothetical protein | C4K41_08145 | Not Available | Negative | 1580023 - 1580145 | 4632.93 |
| d-alanine--d-alanine ligase a | C4K41_08150 | Not Available | Positive | 1580223 - 1581317 | 39348.1 |
| duf2754 domain-containing protein | C4K41_08155 | Not Available | Negative | 1581341 - 1581553 | 8097.92 |
| hypothetical protein | C4K41_08160 | Not Available | Positive | 1581552 - 1581797 | 9408.59 |
| duf2755 domain-containing protein | C4K41_08165 | Not Available | Positive | 1581813 - 1582121 | 11425.2 |
| duf1615 domain-containing protein | C4K41_08170 | Not Available | Negative | 1582180 - 1583274 | 40359.5 |
| peptide antibiotic transporter sbma | C4K41_08175 | Not Available | Negative | 1583287 - 1584507 | 46447.9 |
| hypothetical protein | C4K41_08180 | Not Available | Negative | 1584527 - 1584721 | 7237.05 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | C4K41_08185 | Not Available | Positive | 1584859 - 1586016 | 41925.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





