Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine/purine nucleoside phosphorylase | C4K41_08090 | Not Available | Negative | 1572685 - 1572969 | 10234.9 |
| hypothetical protein | C4K41_08095 | Not Available | Negative | 1573041 - 1573718 | 24932.5 |
| hypothetical protein | C4K41_08100 | Not Available | Negative | 1573766 - 1573945 | 6444.02 |
| protein yaia | C4K41_08105 | Not Available | Negative | 1573976 - 1574167 | 7267.52 |
| shikimate kinase | C4K41_08110 | Not Available | Negative | 1574217 - 1574741 | 19137.0 |
| yaii/yqxd family protein | C4K41_08115 | Not Available | Negative | 1574924 - 1575382 | 16970.4 |
| pyrroline-5-carboxylate reductase | C4K41_08120 | Not Available | Positive | 1575502 - 1576311 | 28248.7 |
| diguanylate cyclase adra | C4K41_08125 | Not Available | Negative | 1576328 - 1577443 | 41515.9 |
| phosphate starvation-inducible protein psif | C4K41_08130 | Not Available | Negative | 1577545 - 1577865 | 11687.2 |
| alkaline phosphatase | C4K41_08135 | Not Available | Negative | 1577984 - 1579399 | 49472.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





