Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | C4K41_08040 | Not Available | Negative | 1560215 - 1561534 | 46225.5 |
| pas domain-containing sensor histidine kinase | C4K41_08045 | Not Available | Negative | 1561941 - 1563236 | 49633.4 |
| dna-binding response regulator | C4K41_08050 | Not Available | Negative | 1563294 - 1563983 | 26435.0 |
| exonuclease subunit sbcd | C4K41_08055 | Not Available | Positive | 1564173 - 1565375 | 44642.0 |
| exonuclease subunit sbcc | C4K41_08060 | Not Available | Positive | 1565372 - 1568515 | 118532.0 |
| mfs transporter araj | C4K41_08065 | Not Available | Positive | 1568641 - 1569825 | 41993.1 |
| fructokinase | C4K41_08070 | Not Available | Negative | 1570094 - 1571002 | 32511.6 |
| recombination-associated protein rdgc | C4K41_08075 | Not Available | Positive | 1571127 - 1572038 | 33995.3 |
| duf2773 domain-containing protein | C4K41_08080 | Not Available | Negative | 1572196 - 1572477 | 10645.8 |
| hypothetical protein | C4K41_08085 | Not Available | Positive | 1572399 - 1572581 | 6771.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





