Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease | C4K41_07840 | Not Available | Negative | 1520014 - 1522368 | 87429.4 |
| atp-dependent clp protease atp-binding subunit clpx | C4K41_07845 | Not Available | Negative | 1522556 - 1523830 | 46358.7 |
| atp-dependent clp protease proteolytic subunit | C4K41_07850 | Not Available | Negative | 1523956 - 1524579 | 23188.1 |
| trigger factor | C4K41_07855 | Not Available | Negative | 1524834 - 1526123 | 47868.1 |
| hypothetical protein | C4K41_07860 | Not Available | Negative | 1526270 - 1526533 | 10015.4 |
| protein bola | C4K41_07865 | Not Available | Negative | 1526467 - 1526784 | 11994.3 |
| polymerase | C4K41_07870 | Not Available | Positive | 1526908 - 1527027 | 4789.67 |
| hypothetical protein | C4K41_07875 | Not Available | Positive | 1527089 - 1527667 | 20951.3 |
| muropeptide transporter ampg | C4K41_07880 | Not Available | Positive | 1527711 - 1529186 | 53262.4 |
| cytochrome o ubiquinol oxidase subunit ii | C4K41_07885 | Not Available | Positive | 1529645 - 1530601 | 35230.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





