Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate amidohydrolase | C4K41_07430 | Not Available | Positive | 1439603 - 1440838 | 45602.4 |
| (s)-ureidoglycine aminohydrolase | C4K41_07435 | Not Available | Positive | 1440849 - 1441634 | 28748.1 |
| glycerate kinase | C4K41_07440 | Not Available | Negative | 1441763 - 1442908 | 38716.9 |
| uracil/xanthine transporter | C4K41_07445 | Not Available | Negative | 1442930 - 1444231 | 47212.2 |
| cyclic amidohydrolase | C4K41_07450 | Not Available | Negative | 1444287 - 1445648 | 49590.4 |
| allantoin permease | C4K41_07455 | Not Available | Negative | 1445708 - 1447162 | 52419.2 |
| 2-hydroxy-3-oxopropionate reductase | C4K41_07460 | Not Available | Negative | 1447332 - 1448210 | 30774.4 |
| hydroxypyruvate isomerase | C4K41_07465 | Not Available | Negative | 1448310 - 1449086 | 29399.1 |
| glyoxylate carboligase | C4K41_07470 | Not Available | Negative | 1449099 - 1450880 | 64778.5 |
| transcriptional regulator | C4K41_07475 | Not Available | Negative | 1450970 - 1451785 | 29287.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





