Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cidb/lrgb family autolysis modulator | C4K41_07000 | Not Available | Negative | 1358762 - 1359457 | 24471.1 |
| hypothetical protein | C4K41_07005 | Not Available | Negative | 1359454 - 1359852 | 14579.6 |
| trna dihydrouridine(16) synthase dusc | C4K41_07010 | Not Available | Positive | 1360091 - 1361041 | 35357.7 |
| hypothetical protein | C4K41_07020 | Not Available | Negative | 1361429 - 1361512 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | C4K41_07030 | Not Available | Positive | 1361736 - 1363172 | 52263.1 |
| sdr family oxidoreductase | C4K41_07035 | Not Available | Positive | 1363225 - 1363986 | 27023.6 |
| deda family protein | C4K41_07040 | Not Available | Negative | 1364106 - 1364684 | 21461.9 |
| yip1 family protein | C4K41_07045 | Not Available | Positive | 1364854 - 1365441 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | C4K41_07050 | Not Available | Positive | 1365615 - 1366547 | 33917.4 |
| d-lactate dehydrogenase | C4K41_07055 | Not Available | Negative | 1366586 - 1368301 | 64707.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





