Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpr family phosphocarrier protein | C4K41_06845 | Not Available | Positive | 1328143 - 1329273 | 39708.2 |
| 1-phosphofructokinase | C4K41_06850 | Not Available | Positive | 1329273 - 1330211 | 33757.6 |
| pts fructose transporter subunit iibc | C4K41_06855 | Not Available | Positive | 1330228 - 1331919 | 57666.8 |
| pseudouridine kinase | C4K41_06860 | Not Available | Positive | 1332375 - 1333316 | 33632.0 |
| pseudouridine-5'-phosphate glycosidase | C4K41_06865 | Not Available | Positive | 1333304 - 1334242 | 32981.9 |
| nupc/nupg family nucleoside cnt transporter | C4K41_06870 | Not Available | Positive | 1334336 - 1335586 | 43484.4 |
| transcriptional regulator yeil | C4K41_06875 | Not Available | Negative | 1335653 - 1336351 | 26914.8 |
| pyrimidine-specific ribonucleoside hydrolase rihb | C4K41_06880 | Not Available | Positive | 1336481 - 1337422 | 33777.1 |
| kinase | C4K41_06885 | Not Available | Negative | 1337690 - 1338778 | 40132.2 |
| endonuclease | C4K41_06890 | Not Available | Negative | 1338782 - 1339639 | 31444.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





