Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C4K41_06795 | Not Available | Negative | 1317461 - 1319275 | 69751.7 |
| cyclic di-gmp phosphodiesterase | C4K41_06800 | Not Available | Negative | 1319357 - 1320913 | 58562.5 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | C4K41_06805 | Not Available | Negative | 1321094 - 1321660 | 21041.1 |
| lipid a 1-diphosphate synthase | C4K41_06810 | Not Available | Negative | 1322072 - 1322785 | 26760.7 |
| gtp-binding protein | C4K41_06815 | Not Available | Negative | 1322824 - 1323810 | 36058.2 |
| mannitol dehydrogenase family protein | C4K41_06820 | Not Available | Negative | 1323928 - 1325394 | 54043.9 |
| elongation factor p-like protein yeip | C4K41_06825 | Not Available | Negative | 1325617 - 1326189 | 21533.9 |
| ykgj family cysteine cluster protein | C4K41_06830 | Not Available | Positive | 1326344 - 1326598 | 8954.96 |
| sugar efflux transporter setb | C4K41_06835 | Not Available | Negative | 1326595 - 1327776 | 42710.6 |
| hypothetical protein | C4K41_06840 | Not Available | Positive | 1327970 - 1328248 | 11182.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





