Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napf | C4K41_06635 | Not Available | Positive | 1291310 - 1291804 | 18048.3 |
| nitrate reductase | C4K41_06640 | Not Available | Positive | 1291794 - 1292057 | 9473.02 |
| periplasmic nitrate reductase subunit alpha | C4K41_06645 | Not Available | Positive | 1292054 - 1294540 | 93063.0 |
| ferredoxin-type protein napg | C4K41_06650 | Not Available | Positive | 1294547 - 1295242 | 24926.1 |
| ferredoxin-type protein naph | C4K41_06655 | Not Available | Positive | 1295229 - 1296092 | 31875.3 |
| periplasmic nitrate reductase electron transfer subunit | C4K41_06660 | Not Available | Positive | 1296089 - 1296538 | 16297.4 |
| cytochrome c-type protein napc | C4K41_06665 | Not Available | Positive | 1296548 - 1297150 | 23101.8 |
| cytochrome c biogenesis atp-binding export protein ccma | C4K41_06670 | Not Available | Positive | 1297163 - 1297786 | 22955.5 |
| heme exporter protein ccmb | C4K41_06675 | Not Available | Positive | 1297783 - 1298445 | 23592.3 |
| heme exporter protein c | C4K41_06680 | Not Available | Positive | 1298487 - 1299224 | 27886.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





