Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2135 domain-containing protein | C4K41_06535 | Not Available | Positive | 1267242 - 1268018 | 28245.2 |
| acetyl-coa c-acetyltransferase | C4K41_06540 | Not Available | Negative | 1268092 - 1269276 | 40368.0 |
| short-chain fatty acids transporter | C4K41_06545 | Not Available | Negative | 1269307 - 1270629 | 47548.7 |
| succinyl-coa--3-ketoacid-coa transferase | C4K41_06550 | Not Available | Negative | 1270626 - 1271276 | 22975.1 |
| acetate coa-transferase subunit alpha | C4K41_06555 | Not Available | Negative | 1271276 - 1271938 | 23522.7 |
| two-component system response regulator | C4K41_06560 | Not Available | Negative | 1272134 - 1273519 | 52151.5 |
| two-component system sensor histidine kinase atos | C4K41_06565 | Not Available | Negative | 1273516 - 1275342 | 67844.2 |
| two-component system sensor histidine kinase rcsc | C4K41_06570 | Not Available | Positive | 1275509 - 1278358 | 106542.0 |
| dna-binding response regulator | C4K41_06575 | Not Available | Negative | 1278558 - 1279208 | 23672.0 |
| phosphotransferase rcsd | C4K41_06580 | Not Available | Negative | 1279225 - 1281897 | 100370.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





