Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | C4K41_06385 | Not Available | Negative | 1224760 - 1225650 | 33005.4 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | C4K41_06390 | Not Available | Negative | 1225647 - 1227629 | 74322.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C4K41_06395 | Not Available | Negative | 1227629 - 1228597 | 36254.3 |
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | C4K41_06400 | Not Available | Negative | 1228601 - 1229740 | 41593.2 |
| histidine phosphatase family protein | C4K41_06405 | Not Available | Positive | 1230048 - 1230650 | 22394.9 |
| nucleoside triphosphatase nudi | C4K41_06410 | Not Available | Negative | 1230689 - 1231114 | 16371.6 |
| hypothetical protein | C4K41_06415 | Not Available | Positive | 1231393 - 1231935 | 18518.6 |
| competence/damage-inducible protein cina | C4K41_06420 | Not Available | Positive | 1232035 - 1233237 | 44192.1 |
| iclr family transcriptional regulator | C4K41_06425 | Not Available | Positive | 1233457 - 1234239 | 29092.2 |
| l-rhamnonate dehydratase | C4K41_06430 | Not Available | Positive | 1234254 - 1235459 | 44137.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





