Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase menf | C4K41_06335 | Not Available | Positive | 1215025 - 1216320 | 48774.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | C4K41_06340 | Not Available | Positive | 1216409 - 1218079 | 61421.6 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | C4K41_06345 | Not Available | Positive | 1218076 - 1218834 | 27658.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | C4K41_06350 | Not Available | Positive | 1218849 - 1219706 | 31634.9 |
| o-succinylbenzoate synthase | C4K41_06355 | Not Available | Positive | 1219706 - 1220668 | 35452.6 |
| o-succinylbenzoate--coa ligase | C4K41_06360 | Not Available | Positive | 1220665 - 1222020 | 50182.5 |
| signal transduction protein pmrd | C4K41_06365 | Not Available | Positive | 1222130 - 1222396 | 9859.03 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | C4K41_06370 | Not Available | Negative | 1222390 - 1222776 | 14076.0 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | C4K41_06375 | Not Available | Negative | 1222776 - 1223111 | 12166.6 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | C4K41_06380 | Not Available | Negative | 1223108 - 1224760 | 62568.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





