Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | C4K41_06085 | Not Available | Positive | 1163638 - 1164450 | 30414.2 |
| deda family protein | C4K41_06090 | Not Available | Positive | 1164533 - 1165192 | 24647.8 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | C4K41_06095 | Not Available | Positive | 1165348 - 1166262 | 33323.9 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | C4K41_06100 | Not Available | Positive | 1166332 - 1167600 | 45453.2 |
| cell division protein dedd | C4K41_06105 | Not Available | Positive | 1167590 - 1168252 | 22967.8 |
| colicin v production protein | C4K41_06110 | Not Available | Positive | 1168784 - 1169272 | 18019.1 |
| amidophosphoribosyltransferase | C4K41_06115 | Not Available | Positive | 1169309 - 1170826 | 56505.3 |
| ubix family flavin prenyltransferase | C4K41_06120 | Not Available | Positive | 1170921 - 1171490 | 20740.3 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | C4K41_06125 | Not Available | Positive | 1171756 - 1172538 | 28060.2 |
| histidine abc transporter substrate-binding protein hisj | C4K41_06130 | Not Available | Positive | 1172759 - 1173541 | 28598.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





