Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrdh-redoxin | C4K41_05820 | Not Available | Negative | 1119051 - 1119296 | 9139.98 |
| hypothetical protein | C4K41_05825 | Not Available | Negative | 1119312 - 1119497 | 6837.32 |
| carboxymuconolactone decarboxylase family protein | C4K41_05830 | Not Available | Negative | 1119505 - 1119936 | 16175.4 |
| plp-dependent aminotransferase family protein | C4K41_05835 | Not Available | Positive | 1120024 - 1121358 | 49768.1 |
| duf883 domain-containing protein | C4K41_05840 | Not Available | Negative | 1121415 - 1121744 | 11847.9 |
| hypothetical protein | C4K41_05845 | Not Available | Positive | 1121896 - 1122240 | 13066.5 |
| l-alanine exporter alae | C4K41_05850 | Not Available | Negative | 1122277 - 1122726 | 16968.1 |
| dna-binding protein stpa | C4K41_05855 | Not Available | Positive | 1123394 - 1123798 | 15361.4 |
| rhodanese-like domain-containing protein ygap | C4K41_05860 | Not Available | Negative | 1123845 - 1124369 | 18672.9 |
| transcriptional regulator | C4K41_05865 | Not Available | Negative | 1124379 - 1124678 | 10596.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





