Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1100088 - 1100164 | Not Available |
| fructose-1-phosphate/6-phosphogluconate phosphatase | C4K41_05725 | Not Available | Positive | 1100445 - 1101011 | 20800.1 |
| deda family protein | C4K41_05730 | Not Available | Positive | 1101008 - 1101436 | 15604.6 |
| glutamate--cysteine ligase | C4K41_05735 | Not Available | Positive | 1101509 - 1103065 | 58272.5 |
| s-ribosylhomocysteine lyase | C4K41_05740 | Not Available | Positive | 1103216 - 1103731 | 19417.3 |
| poly(a) polymerase | C4K41_05745 | Not Available | Negative | 1103782 - 1104894 | 43236.1 |
| 2'-5' rna ligase | C4K41_05750 | Not Available | Negative | 1104891 - 1105598 | 27772.3 |
| multidrug efflux mfs transporter subunit emrb | C4K41_05755 | Not Available | Negative | 1105856 - 1107394 | 55560.6 |
| multidrug export protein emra | C4K41_05760 | Not Available | Negative | 1107411 - 1108583 | 42724.5 |
| transcriptional regulator | C4K41_05765 | Not Available | Negative | 1108710 - 1109240 | 20564.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





