Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 5 | C4K41_05570 | Not Available | Positive | 1071194 - 1072903 | 64970.1 |
| 4fe-4s dicluster domain-containing protein | C4K41_05575 | Not Available | Positive | 1072913 - 1073455 | 20329.4 |
| formate hydrogenlyase | C4K41_05580 | Not Available | Positive | 1073455 - 1074222 | 27999.7 |
| formate hydrogenlyase maturation protein hych | C4K41_05585 | Not Available | Positive | 1074219 - 1074629 | 15451.5 |
| hydrogenase maturation peptidase hyci | C4K41_05590 | Not Available | Positive | 1074622 - 1075092 | 17013.5 |
| transcriptional regulator | C4K41_05595 | Not Available | Positive | 1075328 - 1075747 | 15417.2 |
| 6-phospho-beta-glucosidase | C4K41_05600 | Not Available | Negative | 1075845 - 1077269 | 53847.7 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | C4K41_05605 | Not Available | Negative | 1077278 - 1078735 | 50976.0 |
| laci family dna-binding transcriptional regulator | C4K41_05610 | Not Available | Positive | 1078995 - 1080005 | 36758.3 |
| 4fe-4s dicluster domain-containing protein | C4K41_05615 | Not Available | Positive | 1080154 - 1080681 | 19055.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





