Achromobacter spanius strain 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter spanius strain 6 is a notable bacterium characterized by its habitat in permafrost. This environmental niche suggests its adaptation to extreme cold conditions, which may influence its metabolic processes and interactions within its ecosystem. The presence of flagella indicates that this strain possesses motility, allowing it to navigate its environment, which could facilitate interactions with other microorganisms or plant hosts. Achromobacter spanius strain 6 has a single replicon, a feature that can provide insights into its genome organization and replication mechanisms, potentially reflecting a streamlined adaptation to its permafrost habitat. The strain has been documented to associate with two hosts: Homo sapiens (humans) and Triticum aestivum (wheat). This dual-host capability highlights its potential role in both human health and agricultural contexts. The interactions with these hosts could be significant for understanding the bacterium's ecological roles, such as its influence on plant health or its implications in human microbiomes. The accession number for this strain is PREU00000000.1, which allows for further genomic exploration and research. The ecological implications of Achromobacter spanius strain 6’s presence in permafrost, coupled with its interactions with humans and wheat, underscore its potential importance in biogeochemical cycles and microbial diversity in extreme environments. Understanding this bacterium could provide valuable insights into microbial resilience and adaptability in changing climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter spanius
Strainstrain 6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpermafrost
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter spanius strain 6 scaffold57-size510, whole genome

Gene Summary

Adenine Count

1153569 bp

Thymine Count

1165515 bp

Guanine Count

2143703 bp

Cytosine Count

2106946 bp

Genome Length

6571324 bp

Protein-coding Genes

5775 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorC4E15_22810Not AvailablePositive4988918 - 499022847736.6
atp-dependent clp endopeptidase, proteolytic subunit clppC4E15_22815Not AvailablePositive4990233 - 499088623645.3
atp-dependent clp protease atp-binding subunit clpxC4E15_22820Not AvailablePositive4990988 - 499228647334.0
endopeptidase laC4E15_22825Not AvailablePositive4992496 - 499494690265.7
repressor lexaC4E15_22830Not AvailableNegative4995121 - 499576823096.0
aromatic amino acid aminotransferaseC4E15_22835Not AvailableNegative4995926 - 499712543005.6
excinuclease abc subunit bC4E15_22840Not AvailablePositive4997268 - 499933177319.1
low molecular weight phosphotyrosine protein phosphataseC4E15_22845Not AvailablePositive4999591 - 500008218241.7
fe-s cluster assembly transcriptional regulator iscrC4E15_22850Not AvailablePositive5000275 - 500081719359.1
iscs subfamily cysteine desulfuraseC4E15_22855Not AvailablePositive5000839 - 500205045267.0

Displaying genes 4521 – 4530 of 5924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.