Achromobacter spanius strain 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter spanius strain 6 is a notable bacterium characterized by its habitat in permafrost. This environmental niche suggests its adaptation to extreme cold conditions, which may influence its metabolic processes and interactions within its ecosystem. The presence of flagella indicates that this strain possesses motility, allowing it to navigate its environment, which could facilitate interactions with other microorganisms or plant hosts. Achromobacter spanius strain 6 has a single replicon, a feature that can provide insights into its genome organization and replication mechanisms, potentially reflecting a streamlined adaptation to its permafrost habitat. The strain has been documented to associate with two hosts: Homo sapiens (humans) and Triticum aestivum (wheat). This dual-host capability highlights its potential role in both human health and agricultural contexts. The interactions with these hosts could be significant for understanding the bacterium's ecological roles, such as its influence on plant health or its implications in human microbiomes. The accession number for this strain is PREU00000000.1, which allows for further genomic exploration and research. The ecological implications of Achromobacter spanius strain 6’s presence in permafrost, coupled with its interactions with humans and wheat, underscore its potential importance in biogeochemical cycles and microbial diversity in extreme environments. Understanding this bacterium could provide valuable insights into microbial resilience and adaptability in changing climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter spanius
Strainstrain 6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpermafrost
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter spanius strain 6 scaffold57-size510, whole genome

Gene Summary

Adenine Count

1153569 bp

Thymine Count

1165515 bp

Guanine Count

2143703 bp

Cytosine Count

2106946 bp

Genome Length

6571324 bp

Protein-coding Genes

5775 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseC4E15_17625Not AvailablePositive3833445 - 383416425134.3
4-hydroxy-2-oxoheptanedioate aldolaseC4E15_17630Not AvailableNegative3834244 - 383504427951.5
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseC4E15_17635Not AvailableNegative3835060 - 383586329265.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseC4E15_17640Not AvailableNegative3835882 - 383663727631.9
4-hydroxyphenylacetate isomeraseC4E15_17645Not AvailableNegative3836648 - 383769437303.7
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseC4E15_17650Not AvailablePositive3837881 - 383934752676.0
3,4-dihydroxyphenylacetate 2,3-dioxygenaseC4E15_17655Not AvailablePositive3839370 - 384022131342.1
homoprotocatechuate degradation operon regulator hparC4E15_17660Not AvailableNegative3840249 - 384071917863.6
hypothetical proteinC4E15_17665Not AvailableNegative3840861 - 384149022155.4
dna repair protein radaC4E15_17670Not AvailablePositive3841842 - 384320348228.1

Displaying genes 3501 – 3510 of 5924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.