Achromobacter spanius strain 6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter spanius strain 6 is a notable bacterium characterized by its habitat in permafrost. This environmental niche suggests its adaptation to extreme cold conditions, which may influence its metabolic processes and interactions within its ecosystem. The presence of flagella indicates that this strain possesses motility, allowing it to navigate its environment, which could facilitate interactions with other microorganisms or plant hosts. Achromobacter spanius strain 6 has a single replicon, a feature that can provide insights into its genome organization and replication mechanisms, potentially reflecting a streamlined adaptation to its permafrost habitat. The strain has been documented to associate with two hosts: Homo sapiens (humans) and Triticum aestivum (wheat). This dual-host capability highlights its potential role in both human health and agricultural contexts. The interactions with these hosts could be significant for understanding the bacterium's ecological roles, such as its influence on plant health or its implications in human microbiomes. The accession number for this strain is PREU00000000.1, which allows for further genomic exploration and research. The ecological implications of Achromobacter spanius strain 6’s presence in permafrost, coupled with its interactions with humans and wheat, underscore its potential importance in biogeochemical cycles and microbial diversity in extreme environments. Understanding this bacterium could provide valuable insights into microbial resilience and adaptability in changing climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter spanius
Strainstrain 6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpermafrost
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter spanius strain 6 scaffold57-size510, whole genome

Gene Summary

Adenine Count

1153569 bp

Thymine Count

1165515 bp

Guanine Count

2143703 bp

Cytosine Count

2106946 bp

Genome Length

6571324 bp

Protein-coding Genes

5775 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetic acid degradation operon negative regulatory protein paaxC4E15_08555Not AvailableNegative1871994 - 187292334260.0
1,2-phenylacetyl-coa epoxidase subunit aC4E15_08560Not AvailablePositive1873096 - 187408537312.4
1,2-phenylacetyl-coa epoxidase subunit bC4E15_08565Not AvailablePositive1874258 - 187454210790.8
phenylacetate-coa oxygenase subunit paaiC4E15_08570Not AvailablePositive1874557 - 187532128380.4
phenylacetate-coa oxygenase subunit paajC4E15_08575Not AvailablePositive1875318 - 187582418429.0
phenylacetate-coa oxygenase/reductase subunit paakC4E15_08580Not AvailablePositive1875838 - 187692340129.6
phenylacetic acid degradation protein paanC4E15_08585Not AvailablePositive1876971 - 187863559258.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseC4E15_08590Not AvailablePositive1878650 - 187943828038.6
phenylacetic acid degradation protein paadC4E15_08595Not AvailablePositive1879438 - 187990816487.6
phenylacetate--coa ligaseC4E15_08600Not AvailablePositive1880010 - 188132948567.1

Displaying genes 1791 – 1800 of 5924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.