Candidatus Pantoea alvi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Candidatus Pantoea alvi is a bacterium characterized by the presence of flagella, which suggests it possesses motility capabilities. This trait is significant as it may facilitate the organism's ability to navigate its environment, potentially impacting its ecological interactions. The bacterium has a single replicon, indicating a streamlined genomic structure that may influence its replication and adaptability. The genomic data for Candidatus Pantoea alvi can be accessed through the accession number PQJV00000000.1, which allows for further exploration of its genetic makeup and potential functions. Understanding the genomic characteristics of this bacterium may provide insights into its metabolic pathways, ecological roles, and interactions with other organisms. Given its motility and genomic structure, Candidatus Pantoea alvi may play a role in various environments, particularly in association with other microorganisms. Its flagella may aid in colonization of hosts or substrates, thereby influencing microbial community dynamics. The organism's capacity to move and its genomic organization could be essential factors in its ecological success and adaptation to specific niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesCandidatus Pantoea alvi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Pantoea alvi isolate PSNIH6 NODE_85, whole genome

Gene Summary

Adenine Count

1126768 bp

Thymine Count

1125388 bp

Guanine Count

1553366 bp

Cytosine Count

1545604 bp

Genome Length

5351126 bp

Protein-coding Genes

4635 genes

Non-Coding Genes

486 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
p-type conjugative transfer protein trbjC3408_21575Not AvailableNegative4484058 - 448479526986.1
conjugal transfer protein trbeC3408_21580Not AvailableNegative4484792 - 448724289536.5
conjugal transfer protein trbdC3408_21585Not AvailableNegative4487254 - 44875269576.88
conjugal transfer protein trbcC3408_21590Not AvailableNegative4487523 - 448790613228.4
p-type conjugative transfer atpase trbbC3408_21595Not AvailableNegative4487903 - 448897037684.0
conjugal transfer protein tragC3408_21605Not AvailableNegative4489427 - 449144273459.8
entry exclusion lipoprotein trbkC3408_21610Not AvailableNegative4491725 - 449200010129.3
lysr family transcriptional regulatorC3408_21615Not AvailableNegative4491997 - 449294134999.8
tetr/acrr family transcriptional regulatorC3408_21625Not AvailablePositive4494548 - 449518322968.5
efflux rnd transporter periplasmic adaptor subunitC3408_21630Not AvailablePositive4495234 - 449634938875.8

Displaying genes 4351 – 4360 of 5121 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.