Candidatus Pantoea alvi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Candidatus Pantoea alvi is a bacterium characterized by the presence of flagella, which suggests it possesses motility capabilities. This trait is significant as it may facilitate the organism's ability to navigate its environment, potentially impacting its ecological interactions. The bacterium has a single replicon, indicating a streamlined genomic structure that may influence its replication and adaptability. The genomic data for Candidatus Pantoea alvi can be accessed through the accession number PQJV00000000.1, which allows for further exploration of its genetic makeup and potential functions. Understanding the genomic characteristics of this bacterium may provide insights into its metabolic pathways, ecological roles, and interactions with other organisms. Given its motility and genomic structure, Candidatus Pantoea alvi may play a role in various environments, particularly in association with other microorganisms. Its flagella may aid in colonization of hosts or substrates, thereby influencing microbial community dynamics. The organism's capacity to move and its genomic organization could be essential factors in its ecological success and adaptation to specific niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesCandidatus Pantoea alvi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Pantoea alvi isolate PSNIH6 NODE_85, whole genome

Gene Summary

Adenine Count

1126768 bp

Thymine Count

1125388 bp

Guanine Count

1553366 bp

Cytosine Count

1545604 bp

Genome Length

5351126 bp

Protein-coding Genes

4635 genes

Non-Coding Genes

486 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit aC3408_09440Not AvailablePositive2018035 - 201943249737.3
duf3225 domain-containing proteinC3408_09445Not AvailablePositive2019419 - 201981114673.4
hpp family proteinC3408_09450Not AvailableNegative2019814 - 202054225739.7
oxalate decarboxylaseC3408_09455Not AvailableNegative2020681 - 202189243860.6
allantoinase puueC3408_09460Not AvailableNegative2022198 - 202315436493.8
asp/glu racemaseC3408_09465Not AvailableNegative2023189 - 202392025092.6
gntr family transcriptional regulatorC3408_09470Not AvailableNegative2023917 - 202463926369.7
nitrate reductaseC3408_09475Not AvailablePositive2024784 - 202628054150.4
Trna-aspNot AvailableNot AvailablePositive2026342 - 2026418Not Available
dna polymerase iii subunit epsilonC3408_09485Not AvailableNegative2026553 - 202728426973.2

Displaying genes 2211 – 2220 of 5121 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.