Pseudomonas sp. MWU12-2534b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MWU12-2534b is a bacterial strain isolated from cranberry bog soil and specifically from the rhizospheres of wild cranberry plants. Its habitat suggests an ecological role in the nutrient cycling and microbial community dynamics associated with cranberry cultivation. The strain comprises a single replicon, indicating a relatively simple genomic architecture, which may influence its adaptability and function within its specific ecological niche. The accession number for this strain is PQCH00000000.2, which is essential for referencing its genomic data in scientific literature and databases. Given its isolation from the rhizosphere of wild cranberry plants, Pseudomonas sp. MWU12-2534b may play a significant role in plant health and soil fertility. This bacterium could potentially engage in beneficial interactions with the cranberry plants, such as promoting nutrient availability or suppressing pathogens. Understanding the characteristics and functions of Pseudomonas sp. MWU12-2534b could provide insights into sustainable agriculture practices, especially in cranberry cultivation, where soil microbiomes are crucial for plant health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MWU12-2534b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MWU12-2534b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcranberry bog soil; rhizospheres of wild cranberry plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MWU12-2534b NODE_2093_length_263_cov_0.191176,

Gene Summary

Adenine Count

1420104 bp

Thymine Count

1432460 bp

Guanine Count

2463252 bp

Cytosine Count

2448036 bp

Genome Length

7763860 bp

Protein-coding Genes

7849 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bambC3L29_023415Not AvailableNegative5135756 - 513690740930.8
gtp-binding proteinC3L29_023420Not AvailableNegative5136900 - 513754122716.8
histidine--trna ligaseC3L29_023425Not AvailableNegative5137582 - 513887147853.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)C3L29_023430Not AvailableNegative5138895 - 514000439732.1
helix-turn-helix domain-containing proteinC3L29_023435Not AvailableNegative5140008 - 514103035078.2
type iv pilus biogenesis/stability protein pilwC3L29_023440Not AvailableNegative5141030 - 514178828471.0
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnC3L29_023445Not AvailableNegative5141801 - 514294942178.0
nucleoside-diphosphate kinaseC3L29_023450Not AvailableNegative5142978 - 514340315054.8
fe-s assembly protein iscxC3L29_023455Not AvailableNegative5143498 - 51436987464.78
isc system 2fe-2s type ferredoxinC3L29_023460Not AvailableNegative5143713 - 514405412240.4

Displaying genes 4611 – 4620 of 8046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.