Pseudomonas sp. MWU12-2534b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MWU12-2534b is a bacterial strain isolated from cranberry bog soil and specifically from the rhizospheres of wild cranberry plants. Its habitat suggests an ecological role in the nutrient cycling and microbial community dynamics associated with cranberry cultivation. The strain comprises a single replicon, indicating a relatively simple genomic architecture, which may influence its adaptability and function within its specific ecological niche. The accession number for this strain is PQCH00000000.2, which is essential for referencing its genomic data in scientific literature and databases. Given its isolation from the rhizosphere of wild cranberry plants, Pseudomonas sp. MWU12-2534b may play a significant role in plant health and soil fertility. This bacterium could potentially engage in beneficial interactions with the cranberry plants, such as promoting nutrient availability or suppressing pathogens. Understanding the characteristics and functions of Pseudomonas sp. MWU12-2534b could provide insights into sustainable agriculture practices, especially in cranberry cultivation, where soil microbiomes are crucial for plant health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MWU12-2534b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MWU12-2534b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcranberry bog soil; rhizospheres of wild cranberry plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MWU12-2534b NODE_2093_length_263_cov_0.191176,

Gene Summary

Adenine Count

1420104 bp

Thymine Count

1432460 bp

Guanine Count

2463252 bp

Cytosine Count

2448036 bp

Genome Length

7763860 bp

Protein-coding Genes

7849 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pirin family proteinC3L29_015735Not AvailableNegative3507831 - 350870631553.5
lysr family transcriptional regulatorC3L29_015740Not AvailablePositive3508804 - 350971233911.3
response regulatorC3L29_015745Not AvailableNegative3509804 - 351025617266.7
mgtc/sapb family proteinC3L29_015750Not AvailableNegative3510581 - 351129725064.0
magnesium-translocating p-type atpaseC3L29_015755Not AvailableNegative3511503 - 3514268101856.0
hypothetical proteinC3L29_015760Not AvailablePositive3514552 - 35147798258.28
ornithine monooxygenaseC3L29_015765Not AvailableNegative3515018 - 351635549912.1
rna polymerase subunit sigmaC3L29_015770Not AvailableNegative3516506 - 351698518677.5
efflux rnd transporter periplasmic adaptor subunitC3L29_015775Not AvailablePositive3517316 - 351848842282.6
macb family efflux pump subunitC3L29_015780Not AvailablePositive3518489 - 352046269841.2

Displaying genes 3141 – 3150 of 8046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.