Pseudomonas sp. MWU12-2534b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MWU12-2534b is a bacterial strain isolated from cranberry bog soil and specifically from the rhizospheres of wild cranberry plants. Its habitat suggests an ecological role in the nutrient cycling and microbial community dynamics associated with cranberry cultivation. The strain comprises a single replicon, indicating a relatively simple genomic architecture, which may influence its adaptability and function within its specific ecological niche. The accession number for this strain is PQCH00000000.2, which is essential for referencing its genomic data in scientific literature and databases. Given its isolation from the rhizosphere of wild cranberry plants, Pseudomonas sp. MWU12-2534b may play a significant role in plant health and soil fertility. This bacterium could potentially engage in beneficial interactions with the cranberry plants, such as promoting nutrient availability or suppressing pathogens. Understanding the characteristics and functions of Pseudomonas sp. MWU12-2534b could provide insights into sustainable agriculture practices, especially in cranberry cultivation, where soil microbiomes are crucial for plant health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MWU12-2534b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MWU12-2534b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcranberry bog soil; rhizospheres of wild cranberry plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MWU12-2534b NODE_2093_length_263_cov_0.191176,

Gene Summary

Adenine Count

1420104 bp

Thymine Count

1432460 bp

Guanine Count

2463252 bp

Cytosine Count

2448036 bp

Genome Length

7763860 bp

Protein-coding Genes

7849 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-disulfide reductaseC3L29_014870Not AvailablePositive3312877 - 331382733558.7
leucyl/phenylalanyl-trna--protein transferaseC3L29_014875Not AvailablePositive3313900 - 331458025577.6
arginyltransferaseC3L29_014880Not AvailablePositive3314639 - 331534627693.1
translation initiation factor if-1C3L29_014885Not AvailablePositive3315447 - 33156658303.06
atp-dependent clp protease atp-binding subunit clpaC3L29_014890Not AvailableNegative3315792 - 331806283473.9
atp-dependent clp protease adaptor clpsC3L29_014895Not AvailableNegative3318092 - 331845413625.3
cold shock domain-containing protein cspdC3L29_014900Not AvailablePositive3318679 - 33189369111.88
nadp-dependent isocitrate dehydrogenaseC3L29_014905Not AvailableNegative3319016 - 332027245377.7
nadp-dependent isocitrate dehydrogenaseC3L29_014915Not AvailablePositive3320778 - 332300379959.7
nudix hydrolaseC3L29_014920Not AvailablePositive3323166 - 332361216925.1

Displaying genes 2971 – 2980 of 8046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.