Pseudomonas sp. MWU12-2534b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MWU12-2534b is a bacterial strain isolated from cranberry bog soil and specifically from the rhizospheres of wild cranberry plants. Its habitat suggests an ecological role in the nutrient cycling and microbial community dynamics associated with cranberry cultivation. The strain comprises a single replicon, indicating a relatively simple genomic architecture, which may influence its adaptability and function within its specific ecological niche. The accession number for this strain is PQCH00000000.2, which is essential for referencing its genomic data in scientific literature and databases. Given its isolation from the rhizosphere of wild cranberry plants, Pseudomonas sp. MWU12-2534b may play a significant role in plant health and soil fertility. This bacterium could potentially engage in beneficial interactions with the cranberry plants, such as promoting nutrient availability or suppressing pathogens. Understanding the characteristics and functions of Pseudomonas sp. MWU12-2534b could provide insights into sustainable agriculture practices, especially in cranberry cultivation, where soil microbiomes are crucial for plant health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MWU12-2534b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MWU12-2534b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcranberry bog soil; rhizospheres of wild cranberry plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MWU12-2534b NODE_2093_length_263_cov_0.191176,

Gene Summary

Adenine Count

1420104 bp

Thymine Count

1432460 bp

Guanine Count

2463252 bp

Cytosine Count

2448036 bp

Genome Length

7763860 bp

Protein-coding Genes

7849 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspeC3L29_014330Not AvailablePositive3211126 - 321261954728.9
type ii secretion system protein gspfC3L29_014335Not AvailablePositive3212622 - 321383943574.5
type ii secretion system protein gspgC3L29_014340Not AvailablePositive3213856 - 321429015655.8
type ii secretion system protein gspiC3L29_014350Not AvailablePositive3214814 - 321515812848.3
type ii secretion system protein gspjC3L29_014355Not AvailablePositive3215155 - 321575422345.9
general secretion pathway protein gspkC3L29_014360Not AvailablePositive3215831 - 321663429301.5
general secretion pathway protein gsplC3L29_014365Not AvailablePositive3216641 - 321778042850.8
general secretion pathway protein gspmC3L29_014370Not AvailablePositive3217823 - 321828417043.3
bax inhibitor (bi)-1/ycca family proteinC3L29_014375Not AvailableNegative3218361 - 321903224249.1
Trna-serNot AvailableNot AvailablePositive3219156 - 3219243Not Available

Displaying genes 2871 – 2880 of 8046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.