Pseudomonas sp. MWU12-2534b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MWU12-2534b is a bacterial strain isolated from cranberry bog soil and specifically from the rhizospheres of wild cranberry plants. Its habitat suggests an ecological role in the nutrient cycling and microbial community dynamics associated with cranberry cultivation. The strain comprises a single replicon, indicating a relatively simple genomic architecture, which may influence its adaptability and function within its specific ecological niche. The accession number for this strain is PQCH00000000.2, which is essential for referencing its genomic data in scientific literature and databases. Given its isolation from the rhizosphere of wild cranberry plants, Pseudomonas sp. MWU12-2534b may play a significant role in plant health and soil fertility. This bacterium could potentially engage in beneficial interactions with the cranberry plants, such as promoting nutrient availability or suppressing pathogens. Understanding the characteristics and functions of Pseudomonas sp. MWU12-2534b could provide insights into sustainable agriculture practices, especially in cranberry cultivation, where soil microbiomes are crucial for plant health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MWU12-2534b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MWU12-2534b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcranberry bog soil; rhizospheres of wild cranberry plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MWU12-2534b NODE_2093_length_263_cov_0.191176,

Gene Summary

Adenine Count

1420104 bp

Thymine Count

1432460 bp

Guanine Count

2463252 bp

Cytosine Count

2448036 bp

Genome Length

7763860 bp

Protein-coding Genes

7849 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
septal ring lytic transglycosylase rlpa family proteinC3L29_004970Not AvailableNegative1208975 - 120934913383.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbC3L29_004975Not AvailableNegative1209538 - 121098352901.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataC3L29_004980Not AvailableNegative1210994 - 121244551604.4
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcC3L29_004985Not AvailableNegative1212462 - 121274910298.2
rod shape-determining proteinC3L29_004990Not AvailablePositive1212961 - 121399837005.8
rod shape-determining protein mrecC3L29_004995Not AvailablePositive1214141 - 121522938595.9
rod shape-determining protein mredC3L29_005000Not AvailablePositive1215229 - 121572018381.5
septum formation inhibitor mafC3L29_005005Not AvailablePositive1215764 - 121636921361.6
ribonuclease gC3L29_005010Not AvailablePositive1216426 - 121788354629.0
tigr02099 family proteinC3L29_005015Not AvailablePositive1217959 - 1221762137723.0

Displaying genes 1121 – 1130 of 8046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.