Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase (aminomethyl-transferring) | C3B51_04495 | Not Available | Negative | 1172295 - 1175192 | 104783.0 |
| glycine cleavage system protein h | C3B51_04500 | Not Available | Negative | 1175382 - 1175771 | 13956.6 |
| glycine cleavage system protein t | C3B51_04505 | Not Available | Negative | 1175834 - 1176916 | 38942.7 |
| hypothetical protein | C3B51_04510 | Not Available | Negative | 1176997 - 1177587 | 21451.3 |
| lysr family transcriptional regulator | C3B51_04515 | Not Available | Positive | 1177716 - 1178561 | 30724.5 |
| monooxygenase | C3B51_04520 | Not Available | Negative | 1178763 - 1179929 | 42165.7 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | C3B51_04525 | Not Available | Negative | 1179939 - 1181111 | 43027.8 |
| xaa-pro aminopeptidase | C3B51_04530 | Not Available | Negative | 1181131 - 1182447 | 48752.0 |
| yeca family protein | C3B51_04535 | Not Available | Negative | 1182453 - 1183010 | 20762.5 |
| acyltransferase | C3B51_04545 | Not Available | Negative | 1183514 - 1184611 | 41686.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
