Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | C3B51_03880 | Not Available | Positive | 977808 - 978332 | 19934.8 |
| hypothetical protein | C3B51_03885 | Not Available | Negative | 978329 - 978787 | 17111.7 |
| hypothetical protein | C3B51_03890 | Not Available | Positive | 978845 - 979240 | 15306.6 |
| hypothetical protein | C3B51_03895 | Not Available | Negative | 979297 - 979884 | 22098.1 |
| 3-isopropylmalate dehydratase small subunit | C3B51_03900 | Not Available | Negative | 979966 - 980565 | 22458.4 |
| 3-isopropylmalate dehydratase large subunit | C3B51_03905 | Not Available | Negative | 980562 - 981965 | 50131.6 |
| 3-isopropylmalate dehydrogenase | C3B51_03910 | Not Available | Negative | 981998 - 983074 | 38160.5 |
| 2-isopropylmalate synthase | C3B51_03915 | Not Available | Negative | 983071 - 984618 | 56398.8 |
| alkaline phosphatase | C3B51_03920 | Not Available | Negative | 985704 - 987281 | 60216.0 |
| amino acid abc transporter substrate-binding protein | C3B51_03925 | Not Available | Positive | 987452 - 988258 | 30705.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
