Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | C3B51_03630 | Not Available | Positive | 905492 - 906373 | 33572.6 |
| hypothetical protein | C3B51_03635 | Not Available | Positive | 906471 - 907085 | 22565.8 |
| hypothetical protein | C3B51_03640 | Not Available | Negative | 907069 - 908826 | 65811.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C3B51_03645 | Not Available | Positive | 909290 - 910186 | 32065.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C3B51_03650 | Not Available | Positive | 910197 - 910937 | 25716.6 |
| diaminopimelate decarboxylase | C3B51_03655 | Not Available | Positive | 910937 - 912142 | 44375.8 |
| succinylglutamate desuccinylase | C3B51_03660 | Not Available | Positive | 912145 - 913257 | 40926.8 |
| hypothetical protein | C3B51_03665 | Not Available | Negative | 913392 - 913598 | 7288.87 |
| phospholipase | C3B51_03670 | Not Available | Positive | 913767 - 914789 | 39463.4 |
| gnat family n-acetyltransferase | C3B51_03675 | Not Available | Negative | 914829 - 915722 | 34128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
