Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase-activating protein | C3B51_03530 | Not Available | Negative | 880814 - 881389 | 21961.0 |
| methyltransferase | C3B51_03535 | Not Available | Negative | 881412 - 882062 | 24735.6 |
| cytochrome c4 | C3B51_03540 | Not Available | Negative | 882708 - 883340 | 22340.8 |
| yiha family ribosome biogenesis gtp-binding protein | C3B51_03545 | Not Available | Positive | 883711 - 884361 | 24079.1 |
| duf1285 domain-containing protein | C3B51_03550 | Not Available | Negative | 884393 - 884923 | 19295.0 |
| ycei family protein | C3B51_03555 | Not Available | Negative | 884916 - 885479 | 20242.7 |
| dna polymerase i | C3B51_03560 | Not Available | Negative | 885918 - 888671 | 102611.0 |
| isoprenoid biosynthesis protein elbb | C3B51_03565 | Not Available | Positive | 889106 - 889756 | 22920.4 |
| cytochrome c5 family protein | C3B51_03570 | Not Available | Positive | 889986 - 890375 | 13452.1 |
| diguanylate cyclase | C3B51_03575 | Not Available | Positive | 890545 - 893118 | 97688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
