Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Site-specific integrase | C3B51_17885 | Not Available | Positive | 4362484 - 4363473 | 37229.4 |
| Hypothetical protein | C3B51_17890 | Not Available | Negative | 4363536 - 4363976 | 16199.4 |
| Attr | Not Available | Not Available | Positive | 4365216 - 4365246 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 34 - 148 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 58 - 1591 | Not Available |
| hypothetical protein | C3B51_00005 | Not Available | Positive | 112 - 456 | 13117.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 354 - 468 | Not Available |
| hypothetical protein | C3B51_00010 | Not Available | Positive | 607 - 1518 | 34240.0 |
| hypothetical protein | C3B51_00015 | Not Available | Positive | 1786 - 2493 | 26580.8 |
| dehydrogenase | C3B51_00020 | Not Available | Negative | 2860 - 3972 | 40847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
