Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw domain-containing protein | C3B51_02920 | Not Available | Positive | 734887 - 735555 | 25002.1 |
| iron abc transporter substrate-binding protein | C3B51_02925 | Not Available | Positive | 736275 - 737279 | 37177.7 |
| iron abc transporter permease | C3B51_02930 | Not Available | Positive | 737280 - 738911 | 61091.5 |
| abc transporter | C3B51_02935 | Not Available | Positive | 738911 - 739942 | 38126.6 |
| dyp-type peroxidase | C3B51_02940 | Not Available | Positive | 740085 - 740999 | 34008.1 |
| transcriptional regulator argr | C3B51_02945 | Not Available | Negative | 741006 - 741473 | 16875.6 |
| malate dehydrogenase | C3B51_02950 | Not Available | Positive | 741747 - 742679 | 32020.8 |
| phosphoglycerate dehydrogenase | C3B51_02955 | Not Available | Negative | 742772 - 744001 | 44459.4 |
| ribose 5-phosphate isomerase a | C3B51_02960 | Not Available | Negative | 744014 - 744667 | 22967.6 |
| 5-formyltetrahydrofolate cyclo-ligase | C3B51_02965 | Not Available | Negative | 744777 - 745394 | 23826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
