Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3B51_02770 | Not Available | Positive | 709175 - 709717 | 20964.7 |
| hypothetical protein | C3B51_02775 | Not Available | Positive | 709824 - 712442 | 95509.9 |
| ynbe family lipoprotein | C3B51_02780 | Not Available | Positive | 712458 - 712637 | 6832.32 |
| duf1318 domain-containing protein | C3B51_02785 | Not Available | Positive | 712649 - 712969 | 11361.9 |
| duf1415 domain-containing protein | C3B51_02790 | Not Available | Negative | 712998 - 713543 | 20631.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | C3B51_02795 | Not Available | Negative | 713544 - 714815 | 46411.4 |
| hypothetical protein | C3B51_02800 | Not Available | Positive | 715025 - 716410 | 52329.1 |
| phosphoheptose isomerase | C3B51_02805 | Not Available | Positive | 716498 - 717091 | 21393.5 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | C3B51_02810 | Not Available | Positive | 717088 - 718533 | 51945.1 |
| 3-deoxy-d-manno-octulosonic acid kinase | C3B51_02815 | Not Available | Negative | 718560 - 719294 | 27710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
