Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Type ii toxin-antitoxin system toxin rata | C3B51_17790 | Not Available | Negative | 4344539 - 4344976 | 16490.9 |
| Ssra-binding protein | C3B51_17795 | Not Available | Positive | 4345106 - 4345585 | 18579.7 |
| Beta-ketoacyl-acp synthase i | C3B51_17800 | Not Available | Negative | 4345650 - 4346864 | 42714.7 |
| Bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C3B51_17805 | Not Available | Positive | 4347045 - 4349030 | 73594.2 |
| hypothetical protein | C3B51_17810 | Not Available | Negative | 4349064 - 4349939 | 33253.5 |
| Dna polymerase iii | C3B51_17815 | Not Available | Positive | 4350208 - 4350870 | 24026.4 |
| duf342 domain-containing protein | C3B51_17820 | Not Available | Negative | 4350914 - 4352548 | 59659.5 |
| hypothetical protein | C3B51_17825 | Not Available | Positive | 4352658 - 4352849 | 7209.14 |
| Tmrna,resume; | Not Available | Not Available | Positive | 4353137 - 4353493 | Not Available |
| Attl | Not Available | Not Available | Positive | 4353450 - 4353480 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
