Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | C3B51_01515 | Not Available | Positive | 378915 - 379874 | 33462.0 |
| d-arabinose 5-phosphate isomerase | C3B51_01520 | Not Available | Positive | 379884 - 380855 | 33943.7 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | C3B51_01525 | Not Available | Positive | 380856 - 381407 | 20011.2 |
| lps export abc transporter periplasmic protein lptc | C3B51_01530 | Not Available | Positive | 381404 - 381958 | 21020.0 |
| lipopolysaccharide transport periplasmic protein lpta | C3B51_01535 | Not Available | Positive | 381948 - 382487 | 19794.8 |
| lps export abc transporter atp-binding protein | C3B51_01540 | Not Available | Positive | 382484 - 383209 | 26695.5 |
| rna polymerase factor sigma-54 | C3B51_01545 | Not Available | Positive | 383254 - 384762 | 56656.8 |
| ribosome hibernation promoting factor | C3B51_01550 | Not Available | Positive | 384788 - 385075 | 11054.3 |
| pts cellobiose transporter subunit iia | C3B51_01555 | Not Available | Positive | 385078 - 385533 | 16676.2 |
| rnase adapter rapz | C3B51_01560 | Not Available | Positive | 385546 - 386391 | 32335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
