Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C3B51_01360 | Not Available | Negative | 349366 - 349590 | 8257.11 |
| hypothetical protein | C3B51_01365 | Not Available | Negative | 349583 - 350092 | 18571.9 |
| hypothetical protein | C3B51_01370 | Not Available | Negative | 350247 - 351137 | 33145.3 |
| hypothetical protein | C3B51_01375 | Not Available | Positive | 351434 - 352372 | 35612.1 |
| hypothetical protein | C3B51_01380 | Not Available | Positive | 352382 - 355186 | 105696.0 |
| nad-dependent epimerase | C3B51_01385 | Not Available | Positive | 355858 - 356880 | 38803.3 |
| transcriptional regulator | C3B51_01390 | Not Available | Positive | 357073 - 359187 | 79537.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | C3B51_01400 | Not Available | Negative | 359713 - 360576 | 31207.4 |
| lppc family lipoprotein | C3B51_01405 | Not Available | Positive | 360640 - 362532 | 71220.8 |
| yran family protein | C3B51_01410 | Not Available | Positive | 362536 - 362901 | 14057.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
