Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | C3B51_00860 | Not Available | Negative | 220585 - 221259 | 25470.9 |
| hypothetical protein | C3B51_00865 | Not Available | Negative | 221237 - 222280 | 38436.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C3B51_00870 | Not Available | Negative | 222293 - 223222 | 33914.5 |
| peptidylprolyl isomerase | C3B51_00875 | Not Available | Negative | 223222 - 223662 | 15736.4 |
| lipoprotein signal peptidase | C3B51_00880 | Not Available | Negative | 223659 - 224165 | 18935.0 |
| isoleucine--trna ligase | C3B51_00885 | Not Available | Negative | 224180 - 227008 | 106072.0 |
| bifunctional riboflavin kinase/fad synthetase | C3B51_00890 | Not Available | Negative | 227030 - 227959 | 34674.1 |
| murein biosynthesis integral membrane protein murj | C3B51_00895 | Not Available | Negative | 228036 - 229595 | 55672.8 |
| 30s ribosomal protein s20 | C3B51_00900 | Not Available | Positive | 230076 - 230336 | 9633.91 |
| response regulator | C3B51_00905 | Not Available | Negative | 230495 - 230878 | 14036.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
