Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | C3B51_00810 | Not Available | Negative | 211218 - 212195 | 36500.4 |
| outer membrane protein assembly factor bamd | C3B51_00815 | Not Available | Positive | 212317 - 213078 | 29012.6 |
| nitrogen regulatory protein p-ii | C3B51_00820 | Not Available | Negative | 213165 - 213503 | 12553.3 |
| pilus assembly protein | C3B51_00825 | Not Available | Positive | 213638 - 214177 | 19470.1 |
| pilus assembly protein | C3B51_00830 | Not Available | Positive | 214325 - 214858 | 19782.3 |
| prepilin-type cleavage/methylation domain-containing protein | C3B51_00835 | Not Available | Negative | 214922 - 215344 | 15219.9 |
| pilin biogenesis protein | C3B51_00840 | Not Available | Negative | 215331 - 218459 | 115189.0 |
| pilus assembly protein pilx | C3B51_00845 | Not Available | Negative | 218459 - 218944 | 17466.1 |
| pilus assembly protein pilw | C3B51_00850 | Not Available | Negative | 218944 - 219921 | 36268.9 |
| type iv pilus modification protein pilv | C3B51_00855 | Not Available | Negative | 219923 - 220489 | 20261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
